MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences.

MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences.MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences.

Analysis of multiple sequence alignments can generate vital, testable hypotheses in regards to the phylogenetic historical past and mobile perform of genomic sequences. We describe the MultiPipMaker server, which aligns

The DNA transposon Minos as a tool for transgenesis and functional genomic analysis in vertebrates and invertebrates.

The DNA transposon Minos as a tool for transgenesis and functional genomic analysis in vertebrates and invertebrates.The DNA transposon Minos as a tool for transgenesis and functional genomic analysis in vertebrates and invertebrates.

Transposons are highly effective instruments for conducting genetic manipulation and functional research in organisms which are of scientific, financial, or medical curiosity. Minos, a member of the Tc1/mariner household of

PerPlot & PerScan: tools for analysis of DNA curvature-related periodicity in genomic nucleotide sequences.

PerPlot & PerScan: tools for analysis of DNA curvature-related periodicity in genomic nucleotide sequences.PerPlot & PerScan: tools for analysis of DNA curvature-related periodicity in genomic nucleotide sequences.

BACKGROUNDPeriodic spacing of brief adenine or thymine runs phased with DNA helical interval of ~10.5 bp is related to intrinsic DNA curvature and deformability, which play essential roles in DNA-protein

treeman: an R package for efficient and intuitive manipulation of phylogenetic trees

treeman: an R package for efficient and intuitive manipulation of phylogenetic treestreeman: an R package for efficient and intuitive manipulation of phylogenetic trees

BACKGROUNDPhylogenetic trees are hierarchical constructions used for representing the inter-relationships between organic entities. They are the commonest device for representing evolution and are important to a variety of fields throughout