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The TreeMan object in R is an S4 formal class

The TreeMan object in R is an S4 formal class

The TreeMan object in R is an S4 formal class whose foremost information slot is an inventory—which in R is a vector whose components might be named. All nodes in a TreeMan object are named components in this record (ndlst). Each node normally incorporates the next information slots: the node ID (id), the size of …

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treeman: an R package for efficient and intuitive manipulation of phylogenetic trees

treeman: an R package for efficient and intuitive manipulation of phylogenetic trees

BACKGROUNDPhylogenetic trees are hierarchical constructions used for representing the inter-relationships between organic entities. They are the commonest device for representing evolution and are important to a variety of fields throughout the life sciences. The manipulation of phylogenetic trees-in phrases of including or eradicating tips-is usually carried out by researchers not simply for causes of administration …

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